PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_3791_iso_2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family C2H2
Protein Properties Length: 473aa    MW: 51967.5 Da    PI: 9.9888
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_3791_iso_2genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019240262223
                                          EETTTTEEESSHHHHHHHHHH.T CS
                              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                          +C++Cg+ F  ++ L+ H  + H
  cra_locus_3791_iso_2_len_1705_ver_3 240 TCHKCGEQFGKWEVLEAHHLSkH 262
                                          7*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280241262IPR007087Zinc finger, C2H2
SuperFamilySSF563999.93E-22264472No hitNo description
Gene3DG3DSA:3.90.228.102.1E-7264465IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MGRNLRRNGK EKEXWPLKRD KLFEEKEKIL CFRRRMKEGK SIPTVWFSLK KSLHCKTEPS  60
EVHDPKTRKQ LSSILTKKTG GGRSGCSRSI ANLKDVIHGS SKRHMEKPPS CSPRSIGSSE  120
FLNPITHEVI LSNSRCELKI TSFNGFPEGG GGGGGAACAG GGGGDSTFVG TLRPGTPGPG  180
GHPTMHYFNP SYRHHHPSST PPRKTSSSSA LLLGDREISG LPSKPRPSLE TDANGTSSVT  240
CHKCGEQFGK WEVLEAHHLS KHAVTELAEG DSSRKIVEII CRSSWLKSET QCGRIERVLK  300
VHNMQKTLAR FEEYREMVKI KASKLSKKHP RCIADGNELL RFYGTTVACS LGMNGSSNLC  360
ISERCCVCRI IRNGFSTKKE LKGGIGVFTT STSGRAFESI EIYEVDPSIR KALIVCRVIA  420
GRVHKPLENI QEIAGQTGFD SLAGKVGLYS NIEELYLLNP KALLPCFVVI CKN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006370600.10.0hypothetical protein POPTR_0001s44130g
TrEMBLA0A068UC140.0A0A068UC14_COFCA; Uncharacterized protein
STRINGGLYMA06G41530.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235